Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs72801587 | chr10:70700156 | A/G | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs72803503 | chr10:70736879 | A/C | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs72836482 | chr6:26359241 | A/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs72839445 | chr6:27249686 | G/A | 2.31E-7 | 213 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs72839477 | chr6:27327000 | C/T | 3.56E-7 | 212 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs72841509 | chr6:26368279 | G/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs72841536 | chr6:26378288 | T/A | 3.8E-7 | 212 | 16.43 | 13.38 | 9.77 | KM Plot |
| KIRP | rs7284200 | chr22:18095879 | C/T | 4.24E-5 | 214 | 16.43 | 20.27 | 10.55 | KM Plot |
| KIRP | rs72843784 | chr6:26498758 | G/T | 2.31E-7 | 213 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs72845046 | chr6:27575268 | T/A | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs72845070 | chr6:27668300 | A/C | 2.02E-7 | 211 | 16.45 | 16.68 | 9.77 | KM Plot |
| KIRP | rs72846780 | chr6:28119055 | T/C | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs72846794 | chr6:28137499 | G/A | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs72847313 | chr6:27730082 | C/T | 1.98E-7 | 213 | 16.47 | 13.6 | 9.77 | KM Plot |
| KIRP | rs72854513 | chr6:28265954 | A/T | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |